Metrics: mt

Metrics: mt#

Per-metacell quality scores (compactness, separation, INV, optional purity), rare-type recovery scores, and simple size tables for evaluating partitions from campmc.partition(). Executable examples are on each function page.

mt.metacell_sizes

Return per-metacell cell counts from adata.obs.

mt.quality

Compute per-metacell quality metrics.

mt.recovery_scores

Score how well a partition recovers rare cell types.